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Xero

Automatically pay Xero invoices with Charging Agreements

Let customers authorise once and have their Xero invoices, including repeating invoices, paid automatically as they fall due.

Last updated About 3 hours ago

Charging Agreements let your customers authorise Pay Advantage once, then have their Xero invoices paid automatically as they fall due. You keep invoicing in Xero exactly as you do now, including repeating invoices, and each payment is paid automatically and reconciled in Xero for you.

This is ideal when you want to manage all the invoices and billing from Xero for repeating customer payments such as regular invoices, memberships, rent or subscriptions. This avoid the customer having to pay each individual invoice

How it works

  1. Your customer opens the Pay Now link on one of your Xero invoices.

  2. They choose Set up automatic payments, add their card or bank account and sign the authority. The current invoice is paid straight away.

  3. When you approve their next invoice in Xero, Pay Advantage schedules a payment for it.

  4. On the due date (or the number of days after it that you choose), the invoice is charged and the payment is applied to the invoice in Xero.

Each invoice is charged as its own payment, so two invoices due on the same day create two separate payments. Payments are never taken before an invoice is due.

Before you start

Make sure that:

1. Turn on automatic payment of invoices

  1. Log in to Pay Advantage.

  2. Go to Settings > Xero Settings and open the Settings tab.

  3. Scroll to Automatic Payment of Invoices.

  4. In Which invoices we can pay automatically, choose an option from the table below.

  5. In Days after the due date to take payment, enter 0 to charge on the due date, or a higher number to wait that many days longer.

  6. Click Save.

Option

What happens

Do not pay invoices automatically

Automatic payments are switched off. Customers are not offered the option, and only the current invoice is paid.

Repeating invoices only

Customers are offered automatic payments on invoices created from a Xero repeating invoice. All invoices in that series are paid automatically via the charging agreement.

All invoices

Customers are offered automatic payments on any invoice. Every new invoice you approve for that customer is paid automatically.

Note: The authority your customer signs says payment is never taken before an invoice falls due. The days setting can only charge the invoice after its due date.

2. What your customer sees

Nothing changes for customers who haven't set up automatic payments. They can keep paying each invoice by card, PayTo or BPAY as usual.

Single invoice - Customer can choose automatic payments

Repeating invoice - Customer must complete automatic payments

When a customer opens the Pay Now page for an eligible single invoice, they see a Set up automatic payments button above the usual payment methods. For a repeating invoice they are required to set up automatic payments.

Add a card or bank account

The customer enters the card or bank account they want future invoices paid from, then clicks Continue.

Review and sign the authority

The customer reviews the agreement. It confirms that this invoice and future invoices from your business will be paid automatically from the selected account on or after their due date. They can also:

  • Choose whether to receive a reminder email before each payment.

  • Review any setup and dishonour fees.

  • Enter their name, sign, accept the terms and conditions and click Authorise.

A copy of the signed agreement is emailed to the customer.

Confirmation

The customer sees a confirmation with a reference number. The current invoice is paid, and future invoices will be paid automatically on their due date.

3. Manage your Charging Agreements

Open Charging Agreements from the left-hand menu to see every customer who has set up automatic payments. The list shows the date created, customer, description (the invoice they signed up from), status and the account being charged.

Charging Agreements are kept separate from your scheduled direct debits, so they do not appear in the Direct Debits list or search.

Click an agreement to open it. From here you can see and update:

  • Status: a new agreement may show Pending while our team verifies the authority. Payments do not start until it is approved.

  • Maximum Debit Amount: the most that can be charged for a single invoice under your account's limits.

  • Payment Reminders: whether the customer is emailed before each payment.

  • On-charged fees and On failed payment: which fees are passed on and what happens if a payment fails.

  • Payment account: the card or bank account that is actually charged.

  • Debit authority: the signed authorisation and when it was given.

How payments are handled

Situation

What happens

You approve a new invoice in Xero

A payment is scheduled for that invoice straight away, for its due date plus your days setting.

You change an invoice's amount or due date

The scheduled payment is updated to match.

The customer pays an invoice another way first

The automatic payment only collects the amount still owing, so the invoice is not paid twice.

The customer turned on reminders

They are emailed before each payment is taken.

The payment is processed

It is applied to the matching invoice in Xero through your Pay Advantage clearing account, just like a Pay Now payment.

A payment fails or a card is about to expire

The customer is sent a link to update their payment details. They don't need to sign a new authority, and they can switch between card and bank account.

When an invoice isn't charged

If an invoice can't be charged safely, it is not charged. Instead, it is listed under Settings > Xero Settings > Issues to be resolved, with the reason.

The most common reason is that the invoice is more than the maximum amount allowed for the customer's payment method. To fix it, you can:

  • Ask the customer to switch to a credit card, which can have a higher limit than a bank account.

  • Contact our support team about raising your account limits.

  • Collect that invoice another way, such as a payment request.

Important: If you void or credit an invoice in Xero, do it well before its charge date. A void made shortly before the payment is taken may not stop the charge. If this happens, contact our support team.

Troubleshooting

My customer doesn't see Set up automatic payments

Check the Which invoices we can pay automatically setting is not set to Do not pay invoices automatically. If it's set to Repeating invoices only, the invoice must have been created from a repeating invoice in Xero.

I can't find Charging Agreements in the menu

Charging Agreements must be enabled on your account. Contact our support team.

An agreement is stuck on Pending

New authorities are checked by our team before payments start. If an agreement stays pending for more than one business day, contact support.

I need more help

Contact Pay Advantage Support on 1300 641 310 or email support@payadvantage.com.

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